STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM30534.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (235 aa)    
Predicted Functional Partners:
SLM30535.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.810
SLM30533.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.785
flgC
FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.649
SLM30532.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.590
SLM30537.1
Membrane hypothetical protein; No homology to any previously reported sequences.
     
 0.521
ribBA
Riboflavin biosynthesis protein ribBA (Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
   0.510
flgG
Flagellar component of cell-distal portion of basal-body rod; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family.
   
   0.428
flgF
FlgF.
   
   0.428
flgG-2
FlgG1.
   
   0.428
SLM30538.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
     
 0.428
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.