STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM30931.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (298 aa)    
Predicted Functional Partners:
SLM30930.1
Membrane hypothetical protein; No homology to any previously reported sequences.
       0.773
SLM27817.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.653
SLM31460.1
Oxidoreductase, FAD-binding protein.
  
     0.651
SLM31471.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
 
     0.651
SLM28279.1
Putative FAD dependent oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.648
SLM28472.1
Peptidase M23.
  
  
 0.647
SLM31458.1
Putative Sarcosine oxidase, alpha subunit family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the GcvT family.
 
   
 0.556
SLM29765.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.533
SLM30929.1
Methyltransferase type 11.
       0.527
SLM27955.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.490
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.