STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM31222.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (595 aa)    
Predicted Functional Partners:
SLM32322.1
Putative FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.816
mamA-1
Magnetosome protein MamA (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.764
SLM29968.1
Hypothetical protein; No homology to any previously reported sequences.
  
 0.760
SLM28174.1
MCP methyltransferase/methylesterase CheR/CheB with PAS/PAC sensor.
    
  0.708
cheR-2
CheR methyltransferase, SAM binding domain protein.
    
  0.708
SLM32462.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
    
  0.708
SLM32464.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
    
  0.708
SLM31221.1
H(+)-transporting two-sector ATPase.
       0.683
SLM31063.1
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.679
SLM28318.1
Putative Sensor histidine kinase with ATPase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
 0.654
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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