STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM31396.1Hypothetical protein; No homology to any previously reported sequences. (88 aa)    
Predicted Functional Partners:
SLM30912.1
Transposase (fragment).
 
     0.840
SLM32802.1
Transposase.
  
     0.766
SLM30217.1
Transposase (fragment).
 
  
 0.629
SLM31716.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.478
SLM31392.1
Transposase (fragment).
 
   
 0.464
SLM28414.1
Putative (Acyl-carrier-protein) S-malonyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.435
SLM28282.1
Putative small methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.430
SLM27890.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.409
SLM32244.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.408
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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