STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azlCAzlC. (249 aa)    
Predicted Functional Partners:
SLM31478.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.988
SLM29388.1
Leucine/isoleucine/valine transporter subunit; ATP-binding component of ABC superfamily (modular protein); Belongs to the binding-protein-dependent transport system permease family.
    
  0.672
SLM29587.1
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
    
  0.589
SLM32521.1
Extracellular ligand-binding receptor.
    
 0.581
SLM28092.1
ABC-type transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
    
  0.561
ywfM
Uncharacterized transporter ywfM.
       0.542
SLM29390.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.525
SLM28547.1
Extracellular ligand-binding receptor.
 
  
 0.507
SLM29101.1
Putative Extracellular ligand-binding receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.494
livM
Leucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
    
  0.467
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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