STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM31989.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (570 aa)    
Predicted Functional Partners:
SLM29220.1
Exported hypothetical protein; No homology to any previously reported sequences.
  
     0.641
sseA
SseA.
  
  
  0.562
mdaB
Modulator of drug activity B.
 
     0.550
SLM27704.1
Rhodanese-like domain/cysteine-rich domain protein.
  
  
  0.478
SLM32244.1
Hypothetical protein; No homology to any previously reported sequences.
 
    0.459
SLM31434.1
Exported hypothetical protein; No homology to any previously reported sequences.
  
  
 
0.458
SLM31416.1
Exported hypothetical protein; No homology to any previously reported sequences.
  
  
 
0.457
SLM31688.1
FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein) (fragment).
  
     0.415
SLM27441.1
Hypothetical protein; No homology to any previously reported sequences.
  
  
 
0.414
SLM30355.1
Hypothetical protein; No homology to any previously reported sequences.
  
  
  0.401
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.