STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaEPHA synthase subunit. (347 aa)    
Predicted Functional Partners:
SLM32336.1
Poly-beta-hydroxybutyrate polymerase (modular protein).
 
  
 0.976
SLM32335.1
GGDEF domain family protein.
 
     0.860
SLM28158.1
Poly(3-hydroxyalkanoate) synthetase.
 
  
 0.849
SLM28159.1
MaoC domain protein dehydratase.
 
  
  0.826
SLM32338.1
Hypothetical protein; No homology to any previously reported sequences.
       0.784
SLM28161.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.777
SLM29317.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.705
nuoF
NuoF.
    
 0.699
SLM27622.1
2Fe-2S iron-sulfur cluster binding domain protein.
  
 
 0.691
SLM29658.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
  0.688
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.