STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM32526.1Putative UspA domain-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (310 aa)    
Predicted Functional Partners:
SLM33281.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.720
SLM28358.1
Pheromone shutdown protein TraB.
  
     0.678
SLM32849.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
   0.676
SLM29747.1
Cytochrome c, class III family protein.
  
 
 0.647
SLM31160.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.639
SLM29736.1
Putative universal stress protein UspA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.633
SLM28145.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.547
SLM31629.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.529
uspA-3
UspA7.
       0.509
SLM33280.1
Ferredoxin-2.
  
     0.501
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.