STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mamPDZ-2Homologs of previously reported genes of unknown function; putative enzyme. (354 aa)    
Predicted Functional Partners:
mamE-Nter-2
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  0.910
mamE-Nter-3
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
  0.820
MamE-Nter-1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
  0.815
SLM32753.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
SLM32754.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
mamEO
Probable membrane transporter protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
  0.771
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.746
fkpA
FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.651
SLM29842.1
Putative peptidyl-prolyl cis-trans isomerase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.647
mamA-1
Magnetosome protein MamA (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.606
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.