STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM32782.1Conserved hypothetical protein with an AAA-ATPase domain; Homologs of previously reported genes of unknown function. (521 aa)    
Predicted Functional Partners:
SLM27710.1
AAA-ATPase (fragment).
  
     0.775
SLM29367.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.775
SLM31269.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.775
SLM31878.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.775
SLM29767.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.772
SLM31901.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.766
SLM29768.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.690
dnaB
Replicative DNA helicase;chromosome replication, chain elongation; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.677
SLM32780.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.506
SLM32781.1
Putative protein with PilT involved in plasmid stability; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
       0.506
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.