STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLM32916.1Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (488 aa)    
Predicted Functional Partners:
SLM29482.1
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.897
kbl
Glycine C-acetyltransferase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
 
 
 0.893
SLM33100.1
Putative 3-oxoacyl-(acyl-carrier-protein) reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.876
SLM33112.1
Putative Amino acid adenylation; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the ATP-dependent AMP-binding enzyme family.
    
0.870
SLM32703.1
Putative non-ribosomal peptide synthetase modules and related proteins; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.860
bioB
BioB2.
  
  
 0.856
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
 
  
 0.850
SLM31810.1
Radical SAM domain protein.
  
  
 0.840
SLM31403.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.835
nifJ
Pyruvate-flavodoxin oxidoreductase.
    
  0.835
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.