STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkAPrkA2. (687 aa)    
Predicted Functional Partners:
SLM33082.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0229 family.
 
  
 0.994
SLM33083.1
SpoVR-like family protein.
 
  
 0.986
SLM33084.1
Sensory box histidine kinase/response regulator protein.
 
     0.871
SLM31095.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.629
glgA
GlgA1.
   
    0.625
glgA-2
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.625
SLM27734.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.584
SLM31320.1
Putative adenosine monophosphate-protein transferase HI_0977; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
    0.549
SLM31617.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.527
SLM31947.1
NADPH-dependent FMN reductase, iron-sulfur flavoprotein.
   
    0.527
Your Current Organism:
Desulfamplus magnetovallimortis
NCBI taxonomy Id: 1246637
Other names: Candidatus Desulfamplus magnetomortis, D. magnetovallimortis, DSM 103535, Desulfamplus magnetomortis, JCM 18010, strain BW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.