STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFR_39440Hypothetical protein. (305 aa)    
Predicted Functional Partners:
AFR_39445
Beta-lactamase domain-containing protein; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold.
  
    0.800
AFR_39435
Hypothetical protein.
       0.676
AFR_39430
N-acetyltransferase GCN5; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
     0.621
AFR_39450
Hypothetical protein.
       0.534
AFR_05015
Protein piccolo; COG1983 Putative stress-responsive transcriptional regulator.
  
     0.520
AFR_41930
Hypothetical protein; COG1387 Histidinol phosphatase and related hydrolases of the PHP family.
  
     0.510
AFR_32640
Hypothetical protein.
  
     0.482
AFR_31325
Hypothetical protein.
 
     0.479
AFR_30535
Hypothetical protein.
  
    0.474
AFR_42545
Hypothetical protein.
  
     0.466
Your Current Organism:
Actinoplanes friuliensis
NCBI taxonomy Id: 1246995
Other names: A. friuliensis DSM 7358, Actinoplanes friuliensis DSM 7358, Actinoplanes friuliensis HAG 010964
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.