STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001482195_00147Unannotated protein. (133 aa)    
Predicted Functional Partners:
GCA_001482195_00146
Unannotated protein.
 
    0.837
GCA_001482195_00145
Unannotated protein.
 
    
0.809
GCA_001482195_00148
Unannotated protein.
  
 
  0.783
GCA_001482195_01139
Unannotated protein.
    
 0.734
GCA_001482195_00149
Unannotated protein.
       0.537
GCA_001482195_01763
Unannotated protein.
   
 
  0.488
GCA_001482195_01902
Unannotated protein.
   
 
  0.488
GCA_001482195_02028
Unannotated protein.
   
    0.483
GCA_001482195_02582
Unannotated protein.
    
  0.472
GCA_001482195_01768
Unannotated protein.
   
    0.470
Your Current Organism:
Luteimonas abyssi
NCBI taxonomy Id: 1247514
Other names: CGMCC 1.12611, DSM 25880, L. abyssi, Luteimonas abyssi Fan et al. 2014, Luteimonas sp. XH031, Luteimonas sp. XH038-3, Luteimonas sp. XH80-1, strain XH031
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.