STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001482195_00610Unannotated protein. (241 aa)    
Predicted Functional Partners:
GCA_001482195_00609
Unannotated protein.
 
     0.835
GCA_001482195_02964
Unannotated protein.
   
 0.780
GCA_001482195_00602
Unannotated protein.
     0.715
GCA_001482195_01339
Unannotated protein.
  
 
  0.707
GCA_001482195_02519
Unannotated protein.
    
  0.674
GCA_001482195_01576
Unannotated protein.
    
 0.658
GCA_001482195_00235
Unannotated protein.
  
  
0.565
GCA_001482195_00608
Unannotated protein.
 
     0.502
GCA_001482195_00605
Unannotated protein.
 
   
 0.456
GCA_001482195_00611
Unannotated protein.
       0.456
Your Current Organism:
Luteimonas abyssi
NCBI taxonomy Id: 1247514
Other names: CGMCC 1.12611, DSM 25880, L. abyssi, Luteimonas abyssi Fan et al. 2014, Luteimonas sp. XH031, Luteimonas sp. XH038-3, Luteimonas sp. XH80-1, strain XH031
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.