STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHG62433.1isovaleryl-CoA dehydrogenase. (392 aa)    
Predicted Functional Partners:
AHG62430.1
methylcrotonoyl-CoA carboxylase beta chain.
 
 
 0.986
AHG62429.1
methylcrotonoyl-CoA carboxylase alpha chain.
 
 0.968
fadB
enoyl-CoA hydratase.
  
 0.945
AHG64140.1
Putative enoyl-CoA hydratase.
  
 0.945
AHG64553.1
Putative enoyl-CoA hydratase/isomerase.
  
 0.945
AHG64564.1
Putative enoyl-CoA hydratase/isomerase.
  
 0.945
AHG64728.1
Putative carnitinyl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.945
AHG65669.1
Putative enoyl-CoA hydratase/isomerase.
  
 0.945
AHG65893.1
Putative enoyl-CoA hydratase/isomerase.
  
 0.945
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.940
Your Current Organism:
Advenella mimigardefordensis
NCBI taxonomy Id: 1247726
Other names: A. mimigardefordensis DPN7, Advenella mimigardefordensis DPN7
Server load: low (22%) [HD]