STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHG63220.1Amino acid permease domain-containing protein. (458 aa)    
Predicted Functional Partners:
AHG63219.1
Putative SAM-dependent methyltransferase.
 
    0.928
kdkA
3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.
   
 0.709
pheA
Bifunctional p-protein.
   
 
 0.600
gltB
Ferredoxin-dependent glutamate synthase 1.
  
  
 0.526
pabB
Para-aminobenzoate synthase component 1.
  
 
 0.488
AHG64954.1
Glutathione-regulated potassium-efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.483
lpdA
Dihydrolipoamide dehydrogenase.
   
 
 0.482
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.480
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.477
AHG63264.1
Putative non-ribosomal peptide ligase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.470
Your Current Organism:
Advenella mimigardefordensis
NCBI taxonomy Id: 1247726
Other names: A. mimigardefordensis DPN7, Advenella mimigardefordensis DPN7
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