Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT36992.1 | SIT37039.1 | BN2475_100066 | BN2475_100090 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Redoxin domain protein. | 0.892 |
SIT36992.1 | SIT41279.1 | BN2475_100066 | BN2475_280110 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase subunit II. | 0.999 |
SIT36992.1 | SIT44097.1 | BN2475_100066 | BN2475_460060 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Dihydrolipoamide dehydrogenase. | 0.493 |
SIT37039.1 | SIT36992.1 | BN2475_100090 | BN2475_100066 | Redoxin domain protein. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.892 |
SIT37039.1 | SIT41279.1 | BN2475_100090 | BN2475_280110 | Redoxin domain protein. | Cytochrome c oxidase subunit II. | 0.948 |
SIT37039.1 | SIT41653.1 | BN2475_100090 | BN2475_310139 | Redoxin domain protein. | Peroxiredoxin. | 0.880 |
SIT37039.1 | SIT42787.1 | BN2475_100090 | BN2475_380079 | Redoxin domain protein. | Putative ANTIOXIDANT OXIDOREDUCTASE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.880 |
SIT37039.1 | SIT44097.1 | BN2475_100090 | BN2475_460060 | Redoxin domain protein. | Dihydrolipoamide dehydrogenase. | 0.886 |
SIT37039.1 | SIT44475.1 | BN2475_100090 | BN2475_470200 | Redoxin domain protein. | Putative Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.928 |
SIT37039.1 | ahpC | BN2475_100090 | BN2475_280051 | Redoxin domain protein. | Alkyl hydroperoxide reductase, C22 subunit, thioredoxin-like (detoxification of hydroperoxides); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.880 |
SIT37039.1 | ahpC-2 | BN2475_100090 | BN2475_600017 | Redoxin domain protein. | Peroxiredoxin, Antioxidant oxidoreductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.880 |
SIT37039.1 | msrA | BN2475_100090 | BN2475_280026 | Redoxin domain protein. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.906 |
SIT37039.1 | msrA-2 | BN2475_100090 | BN2475_320088 | Redoxin domain protein. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.906 |
SIT41279.1 | SIT36992.1 | BN2475_280110 | BN2475_100066 | Cytochrome c oxidase subunit II. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
SIT41279.1 | SIT37039.1 | BN2475_280110 | BN2475_100090 | Cytochrome c oxidase subunit II. | Redoxin domain protein. | 0.948 |
SIT41279.1 | SIT44097.1 | BN2475_280110 | BN2475_460060 | Cytochrome c oxidase subunit II. | Dihydrolipoamide dehydrogenase. | 0.733 |
SIT41653.1 | SIT37039.1 | BN2475_310139 | BN2475_100090 | Peroxiredoxin. | Redoxin domain protein. | 0.880 |
SIT41653.1 | SIT44097.1 | BN2475_310139 | BN2475_460060 | Peroxiredoxin. | Dihydrolipoamide dehydrogenase. | 0.500 |
SIT41653.1 | SIT44475.1 | BN2475_310139 | BN2475_470200 | Peroxiredoxin. | Putative Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.955 |
SIT42787.1 | SIT37039.1 | BN2475_380079 | BN2475_100090 | Putative ANTIOXIDANT OXIDOREDUCTASE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Redoxin domain protein. | 0.880 |
page 1 of 3