Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT37778.1 | SIT48865.1 | BN2475_120206 | BN2475_1150024 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | TonB-dependent receptor. | 0.960 |
SIT38555.1 | SIT43857.1 | BN2475_150159 | BN2475_450110 | TonB family protein. | TolB protein. | 0.665 |
SIT38555.1 | SIT48865.1 | BN2475_150159 | BN2475_1150024 | TonB family protein. | TonB-dependent receptor. | 0.975 |
SIT41693.1 | SIT43857.1 | BN2475_310160 | BN2475_450110 | Hypothetical protein; No homology to any previously reported sequences. | TolB protein. | 0.674 |
SIT41693.1 | SIT48865.1 | BN2475_310160 | BN2475_1150024 | Hypothetical protein; No homology to any previously reported sequences. | TonB-dependent receptor. | 0.970 |
SIT42754.1 | SIT43857.1 | BN2475_380064 | BN2475_450110 | Protein TolA. | TolB protein. | 0.674 |
SIT42754.1 | SIT48865.1 | BN2475_380064 | BN2475_1150024 | Protein TolA. | TonB-dependent receptor. | 0.975 |
SIT42904.1 | SIT48865.1 | BN2475_380154 | BN2475_1150024 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | TonB-dependent receptor. | 0.946 |
SIT43857.1 | SIT38555.1 | BN2475_450110 | BN2475_150159 | TolB protein. | TonB family protein. | 0.665 |
SIT43857.1 | SIT41693.1 | BN2475_450110 | BN2475_310160 | TolB protein. | Hypothetical protein; No homology to any previously reported sequences. | 0.674 |
SIT43857.1 | SIT42754.1 | BN2475_450110 | BN2475_380064 | TolB protein. | Protein TolA. | 0.674 |
SIT43857.1 | SIT47152.1 | BN2475_450110 | BN2475_710086 | TolB protein. | TonB family protein. | 0.665 |
SIT43857.1 | SIT48231.1 | BN2475_450110 | BN2475_950043 | TolB protein. | TonB protein. | 0.662 |
SIT43857.1 | SIT48865.1 | BN2475_450110 | BN2475_1150024 | TolB protein. | TonB-dependent receptor. | 0.768 |
SIT47152.1 | SIT43857.1 | BN2475_710086 | BN2475_450110 | TonB family protein. | TolB protein. | 0.665 |
SIT47152.1 | SIT48865.1 | BN2475_710086 | BN2475_1150024 | TonB family protein. | TonB-dependent receptor. | 0.976 |
SIT48231.1 | SIT43857.1 | BN2475_950043 | BN2475_450110 | TonB protein. | TolB protein. | 0.662 |
SIT48231.1 | SIT48865.1 | BN2475_950043 | BN2475_1150024 | TonB protein. | TonB-dependent receptor. | 0.970 |
SIT48865.1 | SIT37778.1 | BN2475_1150024 | BN2475_120206 | TonB-dependent receptor. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.960 |
SIT48865.1 | SIT38555.1 | BN2475_1150024 | BN2475_150159 | TonB-dependent receptor. | TonB family protein. | 0.975 |
page 1 of 2