STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hyaBHydrogenase 1, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (618 aa)    
Predicted Functional Partners:
hyaA
Hydrogenase 1, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.999
hyaC
Hydrogenase 1, b-type cytochrome subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier.
 
 0.999
hypA
Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.992
hyaD
Protein involved in processing of HyaA and HyaB proteins; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
 0.988
hoxQ
Hydrogenase expression/formation protein HoxQ.
 
  
 0.965
hoxV
Hydrogenase expression/formation protein HoxV.
 
  
  0.926
hoxL
Hydrogenase expression/formation protein HoxL.
 
 
 0.921
SIT39512.1
Succinate dehydrogenase, cytochrome b556 subunit.
   
 
  0.886
hypD
Protein required for maturation of hydrogenases; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the HypD family.
 
 
 0.885
hypB
Hydrogenase nickel incorporation protein HypB.
 
   
 0.869
Your Current Organism:
Paraburkholderia ribeironis
NCBI taxonomy Id: 1247936
Other names: Burkholderia sp. STM 7168, Burkholderia sp. STM 7217, Burkholderia sp. STM 7296, DSM 101188, LMG 29351, LMG:29351, P. ribeironis, Paraburkholderia ribeironis Bournaud et al. 2017, STM 7296, STM:7296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.