STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tctDTranscriptional regulatory protein tctD. (231 aa)    
Predicted Functional Partners:
SIT41661.1
Integral membrane sensor signal transduction histidine kinase.
 
  0.996
SIT41665.1
Histidine kinase.
 
  0.991
SIT36092.1
PAS domain S-box.
 
 0.985
SIT44190.1
Signal Transduction Histidine Kinases (STHK).
  
  0.984
SIT39168.1
PAS/PAC sensor hybrid histidine kinase.
 0.983
SIT37352.1
Integral membrane sensor hybrid histidine kinase.
 
 0.942
tctD-2
Transcriptional regulatory protein tctD.
 
  
 
0.940
SIT38100.1
PAS domain S-box (fragment).
 
 0.930
SIT45253.1
Periplasmic sensor hybrid histidine kinase.
 
 0.923
SIT45132.1
Putative CheA signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.915
Your Current Organism:
Paraburkholderia ribeironis
NCBI taxonomy Id: 1247936
Other names: Burkholderia sp. STM 7168, Burkholderia sp. STM 7217, Burkholderia sp. STM 7296, DSM 101188, LMG 29351, LMG:29351, P. ribeironis, Paraburkholderia ribeironis Bournaud et al. 2017, STM 7296, STM:7296
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