STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT42143.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
SIT43232.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.752
SIT36123.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.747
SIT41119.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.744
SIT38660.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.680
SIT38317.1
LysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family.
  
     0.647
SIT38856.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.634
SIT42839.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.632
SIT42141.1
Hypothetical protein; No homology to any previously reported sequences.
       0.615
SIT47232.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.600
SIT39067.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.597
Your Current Organism:
Paraburkholderia ribeironis
NCBI taxonomy Id: 1247936
Other names: Burkholderia sp. STM 7168, Burkholderia sp. STM 7217, Burkholderia sp. STM 7296, DSM 101188, LMG 29351, LMG:29351, P. ribeironis, Paraburkholderia ribeironis Bournaud et al. 2017, STM 7296, STM:7296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.