Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT34950.1 | SIT45191.1 | BN2475_30015 | BN2475_530057 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.725 |
SIT34950.1 | cheA | BN2475_30015 | BN2475_370032 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Chemotaxis protein CheA. | 0.995 |
SIT34950.1 | cheB | BN2475_30015 | BN2475_370038 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Fused chemotaxis regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.990 |
SIT34950.1 | cheR | BN2475_30015 | BN2475_370036 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Chemotaxis regulator, protein-glutamate methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.988 |
SIT34950.1 | cheW | BN2475_30015 | BN2475_370033 | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | Purine-binding chemotaxis protein; Function of homologous gene experimentally demonstrated in an other organism; regulator. | 0.997 |
SIT39124.1 | SIT45191.1 | BN2475_190077 | BN2475_530057 | Methyl-accepting chemotaxis sensory transducer. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.451 |
SIT39124.1 | cheA | BN2475_190077 | BN2475_370032 | Methyl-accepting chemotaxis sensory transducer. | Chemotaxis protein CheA. | 0.995 |
SIT39124.1 | cheB | BN2475_190077 | BN2475_370038 | Methyl-accepting chemotaxis sensory transducer. | Fused chemotaxis regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.986 |
SIT39124.1 | cheR | BN2475_190077 | BN2475_370036 | Methyl-accepting chemotaxis sensory transducer. | Chemotaxis regulator, protein-glutamate methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.986 |
SIT39124.1 | cheW | BN2475_190077 | BN2475_370033 | Methyl-accepting chemotaxis sensory transducer. | Purine-binding chemotaxis protein; Function of homologous gene experimentally demonstrated in an other organism; regulator. | 0.995 |
SIT45191.1 | SIT34950.1 | BN2475_530057 | BN2475_30015 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Methyl-accepting chemotaxis sensory transducer with Cache sensor. | 0.725 |
SIT45191.1 | SIT39124.1 | BN2475_530057 | BN2475_190077 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Methyl-accepting chemotaxis sensory transducer. | 0.451 |
SIT45191.1 | SIT48701.1 | BN2475_530057 | BN2475_1080021 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Methyl-accepting chemotaxis protein. | 0.453 |
SIT45191.1 | cheA | BN2475_530057 | BN2475_370032 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Chemotaxis protein CheA. | 0.996 |
SIT45191.1 | cheB | BN2475_530057 | BN2475_370038 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Fused chemotaxis regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.990 |
SIT45191.1 | cheR | BN2475_530057 | BN2475_370036 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Chemotaxis regulator, protein-glutamate methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.991 |
SIT45191.1 | cheW | BN2475_530057 | BN2475_370033 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Purine-binding chemotaxis protein; Function of homologous gene experimentally demonstrated in an other organism; regulator. | 0.999 |
SIT45191.1 | tas-3 | BN2475_530057 | BN2475_590059 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Methyl-accepting chemotaxis aspartate transducer. | 0.451 |
SIT45191.1 | tse-2 | BN2475_530057 | BN2475_370034 | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | Methyl-accepting chemotaxis serine transducer. | 0.455 |
SIT45804.1 | cheA | BN2475_590045 | BN2475_370032 | Methyl-accepting chemotaxis protein. | Chemotaxis protein CheA. | 0.995 |
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