STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT45778.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (272 aa)    
Predicted Functional Partners:
SIT45763.1
Putative Flp pilus assembly CpaB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.988
SIT45772.1
Flp pilus assembly protein TadB.
 
  
 0.978
SIT45774.1
Tight adherence protein C.
 
    0.966
SIT45765.1
Type II and III secretion system protein; Belongs to the bacterial secretin family.
 
  
 0.952
SIT45767.1
Type II/IV secretion system protein E.
 
  
 0.932
SIT45776.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.931
SIT41204.1
Putative pilus assembly protein CpaE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.918
SIT45759.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.912
SIT45758.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.898
SIT45779.1
Soluble lytic murein transglycosylase-like protein (modular protein).
       0.778
Your Current Organism:
Paraburkholderia ribeironis
NCBI taxonomy Id: 1247936
Other names: Burkholderia sp. STM 7168, Burkholderia sp. STM 7217, Burkholderia sp. STM 7296, DSM 101188, LMG 29351, LMG:29351, P. ribeironis, Paraburkholderia ribeironis Bournaud et al. 2017, STM 7296, STM:7296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.