STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT36332.1Glycosyl transferase family 2. (276 aa)    
Predicted Functional Partners:
SIT36334.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
   
 0.927
SIT39391.1
Undecaprenyl-phosphate galactosephosphotransferase.
 
 
 0.866
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
 
 0.865
SIT43941.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
 
 0.865
SIT42867.1
Undecaprenyl-phosphate glucose phosphotransferase.
 
 
 0.864
galE-2
UDP-galactose-4-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.763
SIT36330.1
Group 1 glucosyll transferase.
 
    0.738
SIT40815.1
Glycosyl transferase family 2.
 
  
 0.588
SIT44173.1
Lipid A core-O-antigen ligase-like enyme.
 
  
 0.576
SIT39033.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.532
Your Current Organism:
Paraburkholderia ribeironis
NCBI taxonomy Id: 1247936
Other names: Burkholderia sp. STM 7168, Burkholderia sp. STM 7217, Burkholderia sp. STM 7296, DSM 101188, LMG 29351, LMG:29351, P. ribeironis, Paraburkholderia ribeironis Bournaud et al. 2017, STM 7296, STM:7296
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