STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000733125_00739Unannotated protein. (248 aa)    
Predicted Functional Partners:
GCA_000733125_02608
Unannotated protein.
  
     0.625
GCA_000733125_02750
Unannotated protein.
  
     0.593
GCA_000733125_01211
Unannotated protein.
  
     0.583
GCA_000733125_00061
Unannotated protein.
  
     0.520
GCA_000733125_01328
Unannotated protein.
  
     0.498
GCA_000733125_01276
Unannotated protein.
  
     0.474
GCA_000733125_00738
Unannotated protein.
       0.432
Your Current Organism:
Parvularcula oceani
NCBI taxonomy Id: 1247963
Other names: CGMCC 1.12400, LMG 27362, LMG:27362, P. oceani, Parvularcula oceanus, Parvularcula sp. JLT2013, strain JLT2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.