STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000331225_02827Unannotated protein. (741 aa)    
Predicted Functional Partners:
GCA_000331225_02936
Unannotated protein.
 
  
 0.803
GCA_000331225_02176
Unannotated protein.
  
  
 0.780
GCA_000331225_01976
Unannotated protein.
  
  
 0.758
GCA_000331225_00534
Unannotated protein.
  
  
 0.743
GCA_000331225_02826
Unannotated protein.
  
    0.718
GCA_000331225_02053
Unannotated protein.
  
  
 0.701
GCA_000331225_02043
Unannotated protein.
   
  
 0.654
GCA_000331225_00609
Unannotated protein.
 
  
 0.626
GCA_000331225_02204
Unannotated protein.
 
    0.598
GCA_000331225_01022
Unannotated protein.
 
    0.565
Your Current Organism:
Sandarakinorhabdus sp. AAP62
NCBI taxonomy Id: 1248916
Other names: S. sp. AAP62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.