STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA46908.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)    
Predicted Functional Partners:
ORA47759.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.700
ORA46713.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.700
ORA43219.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.626
ORA45056.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.584
ORA49260.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.569
gcvP
Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.536
ORA46909.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
bioB
Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
 
 
 0.404
ORA44539.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.401
Your Current Organism:
Mycolicibacterium celeriflavum
NCBI taxonomy Id: 1249101
Other names: DSM 46765, JCM 18439, M. celeriflavum, Mycobacterium celeriflavum, Mycobacterium celeriflavum Shahraki et al. 2015, Mycobacterium sp. 852002-51296_SCH5728562-a, Mycobacterium sp. AFPC-000207, Mycobacterium sp. E498, Mycobacterium sp. FI-09258, Mycobacterium sp. FI-10161, Mycolicibacterium celeriflavum (Shahraki et al. 2015) Gupta et al. 2018, strain AFPC-000207
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.