STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV97612.1Hypothetical protein. (355 aa)    
Predicted Functional Partners:
AFV96382.1
COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP.
  
  
 0.929
AFV97611.1
Hypothetical protein; COG1573 Uracil-DNA glycosylase.
       0.814
AFV97613.1
COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
       0.778
AFV97494.1
N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit.
   
    0.689
AFV97614.1
Hypothetical protein; COG2193 Bacterioferritin (cytochrome b1).
       0.596
AFV97615.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
       0.596
AFV97610.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
       0.565
Your Current Organism:
Sulfuricurvum sp. RIFRC1
NCBI taxonomy Id: 1249480
Other names: C. Sulfuricurvum sp. RIFRC-1, Candidatus Sulfuricurvum sp. RIFRC-1, uncultured Sulfuricurvum sp. RIFRC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.