STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOQ88255.1Transmembrane secretion effector. (413 aa)    
Predicted Functional Partners:
EOQ87974.1
Sigma factor regulatory protein, FecR/PupR family.
 
     0.721
EOQ88387.1
Hypothetical protein.
       0.717
EOQ88060.1
Hypothetical protein.
       0.675
EOQ88699.1
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.626
EOQ87528.1
4Fe-4S dicluster domain protein.
     
 0.605
pheA
Chorismate mutase.
  
 
 0.597
EOQ89631.1
HlyD family secretion protein.
 
 0.585
EOQ87706.1
Chorismate binding enzyme.
   
 
 0.532
EOQ90061.1
Biotin-lipoyl-like domain protein.
  
 0.521
EOQ87956.1
Hypothetical protein; Identified by glimmer; putative.
       0.445
Your Current Organism:
Leptospira yanagawae
NCBI taxonomy Id: 1249483
Other names: L. yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523, Leptospira genomosp. 5 str. ATCC 700523, Leptospira yanagawae serovar Saopaulo str. ATCC 700523 = Sao Paulo, Leptospira yanagawae serovar Saopaulo str. Sao Paulo, Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.