STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspEType II secretion system protein E. (558 aa)    
Predicted Functional Partners:
EOQ90415.1
Type II secretion system protein F.
 
 
 0.999
EOQ90597.1
Putative type II secretion system protein G.
 
 0.992
EOQ90698.1
Hypothetical protein.
  
 0.974
EOQ90642.1
Putative type II secretion system protein D.
 
  
 0.967
EOQ90458.1
Hypothetical protein.
 
 
 
 0.953
EOQ90475.1
Peptidase A24, N-terminal domain protein.
 
 
 0.922
EOQ90591.1
Prepilin-type cleavage/methylation N-terminal domain protein.
       0.840
EOQ90689.1
Hypothetical protein.
  
  
 0.834
EOQ90499.1
Putative type II secretion system protein K.
  
  
 0.774
EOQ90385.1
Putative type II secretion system protein J.
     
 0.770
Your Current Organism:
Leptospira yanagawae
NCBI taxonomy Id: 1249483
Other names: L. yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523, Leptospira genomosp. 5 str. ATCC 700523, Leptospira yanagawae serovar Saopaulo str. ATCC 700523 = Sao Paulo, Leptospira yanagawae serovar Saopaulo str. Sao Paulo, Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.