STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO46583.1Hypothetical protein; Pfam:pfam01764 Lipase (class 3). (240 aa)    
Predicted Functional Partners:
ALO45777.1
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
  0.900
ALO45695.1
AMP-dependent synthetase and ligase; Pfam:pfam00501 AMP-binding enzyme.
     
  0.800
ALO46136.1
Long-chain-fatty-acid--CoA ligase; Pfam:pfam00501 AMP-binding enzyme.
     
  0.800
ALO44982.1
AMP-binding enzyme, putative; Pfam:pfam00501 AMP-binding enzyme.
     
  0.800
ALO45068.1
Long-chain acyl-CoA synthetase protein; Pfam:pfam00501 AMP-binding enzyme.
     
  0.800
ALO45378.1
Hypothetical protein; Pfam:pfam00501 AMP-binding enzyme.
     
  0.800
ALO45663.1
AMP-dependent synthetase and ligase; Pfam:pfam00501 AMP-binding enzyme.
     
  0.800
ALO46584.1
Hydrolase; Pfam:pfam07486 Cell Wall Hydrolase.
  
    0.713
ALO46585.1
Hypothetical protein.
       0.709
ALO46586.1
Hypothetical protein.
       0.432
Your Current Organism:
Pseudohongiella spirulinae
NCBI taxonomy Id: 1249552
Other names: KCTC 32221, LMG 27470, LMG:27470, Nonhongiella spirulinensis, P. spirulinae, Pseudohongiella spirulinae corrig. Wang et al. 2015, gamma proteobacterium Ma-20, strain Ma-20
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