STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_0510tRNA 2-thiouridine synthesizing protein E; Part of a sulfur-relay system. (101 aa)    
Predicted Functional Partners:
D779_2144
Sulfite reductase beta subunit.
 
 
 
 0.968
D779_2143
Sulfite reductase alpha subunit.
 
 
 
 0.967
D779_2147
tRNA 5-methylaminomethyl-2-thiouridine synthase TusB.
 
 0.947
D779_2145
tRNA 5-methylaminomethyl-2-thiouridine synthase TusD.
 
 
 0.909
D779_2138
tRNA 2-thiouridine synthesizing protein E; Part of a sulfur-relay system.
  
  
  0.893
D779_2146
tRNA 5-methylaminomethyl-2-thiouridine synthase TusC; Belongs to the DsrF/TusC family.
 
 
 0.893
D779_2758
tRNA 2-thiouridine synthesizing protein E.
  
  
 0.873
D779_1708
4Fe-4S ferredoxin, nitrogenase-associated.
   
 
 0.870
D779_2150
Sulfite reduction-associated complex DsrMKJOP protein DsrK.
 
 
 0.852
D779_1104
Heterodisulfide reductase.
 
 
 0.821
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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