STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_0654Putative TonB protein. (311 aa)    
Predicted Functional Partners:
D779_3853
MotA/TolQ/ExbB proton channel family protein.
 
 0.977
D779_0805
TPR repeat protein.
  
 0.966
D779_3854
Biopolymer transport protein ExbD/TolR.
 
 0.962
D779_2763
Outer membrane vitamin B12 receptor BtuB.
 
 
 0.943
D779_1988
MotA/TolQ/ExbB proton channel.
 
 0.931
D779_2874
Biopolymer transport protein ExbD/TolR.
 
 0.929
D779_2876
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
 0.928
D779_0514
Biopolymer transport protein ExbD/TolR.
  
 0.926
tolR
Tol biopolymer transport system, TolR protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.926
tolQ
MotA/TolQ/ExbB proton channel family protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 0.926
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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