STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_1418Hypothetical protein. (508 aa)    
Predicted Functional Partners:
D779_1600
Heat shock protein HtpX.
     
 0.891
htpX
Putative protease htpX; Belongs to the peptidase M48B family.
     
 0.891
D779_3545
Peptidase, M48 family.
     
 0.891
D779_1207
ATPase, AAA family.
    
 
 0.869
D779_1700
ATP-dependent helicase HrpA.
  
 
  0.861
D779_2366
Hypothetical protein.
   
 
 0.855
rpsK
SSU ribosomal protein S11p (S14e); Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
    
  0.847
D779_4196
Benzoyl-CoA oxygenase component A (boxA).
    
 0.846
D779_3496
ATP-dependent helicase HrpB.
    
  0.838
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
 
 0.827
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.