STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_1904Hypothetical protein. (348 aa)    
Predicted Functional Partners:
D779_1905
Hypothetical protein.
 
 0.999
D779_2419
Hypothetical protein.
 
 
 0.759
D779_0756
Serine/threonine kinase.
 
 
 0.758
D779_1417
Hypothetical protein.
  
 
 0.749
D779_2382
NACHT nucleoside triphosphatase.
  
 
 0.725
D779_2853
L-proline glycine betaine binding ABC transporter protein ProX.
 
     0.620
D779_3911
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
  
  0.617
D779_2820
Cysteine desulfurase.
 
  
 0.603
D779_2137
Cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.578
D779_1906
Hypothetical protein.
       0.569
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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