STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_1907Putative Lon protease. (234 aa)    
Predicted Functional Partners:
D779_0938
Sulfur carrier protein adenylyltransferase ThiF.
    
 0.912
D779_4164
DNA repair exonuclease family protein YhaO.
    
 0.906
D779_1336
Hypothetical protein.
  
 
  0.883
D779_0718
Metallo-beta-lactamase family protein, RNA-specific.
     
 0.843
D779_3787
Octaheme tetrathionate reductase.
    
  0.830
D779_2808
Hypothetical protein.
    
 0.808
D779_2683
ABC transporter ATP-binding protein.
    
 0.796
D779_1169
Hypothetical protein.
     
 0.770
D779_2677
General secretion pathway protein A.
     
 0.770
D779_2664
Aldehyde decarbonylase.
  
     0.520
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.