STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_1909Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. (93 aa)    
Predicted Functional Partners:
D779_4122
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
 
 
 0.995
D779_3950
Chaperone protein HscB.
 
 
 0.983
D779_2402
Iron-sulfur cluster assembly protein SufB.
  
 
 0.976
D779_4121
Cysteine desulfurase, NifS subfamily; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
  
 
 0.942
D779_2403
Iron-sulfur cluster assembly ATPase protein SufC.
  
 
 0.924
D779_2404
Iron-sulfur cluster assembly protein SufD.
  
 
 0.922
D779_1963
Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.884
D779_0753
DnaJ-like protein DjlA.
  
 
 0.824
D779_2628
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress; Belongs to the GcvT family.
 
 
 0.807
D779_1054
Hypothetical protein.
    
 
 0.803
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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