STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_2139Hypothetical protein. (230 aa)    
Predicted Functional Partners:
D779_2140
Hypothetical protein.
       0.793
D779_0090
Hypothetical protein; Belongs to the peptidase S24 family.
  
     0.771
D779_2154
Sulfite reduction-associated complex DsrMKJOP protein DsrP.
  
     0.767
D779_2152
Sulfite reduction-associated complex DsrMKJOP multiheme protein DsrJ.
 
     0.765
D779_2141
Hypothetical protein.
       0.723
D779_2144
Sulfite reductase beta subunit.
 
     0.702
D779_2151
Glutamate synthase.
  
     0.701
D779_1575
Nitrate/nitrite sensor protein.
  
     0.697
D779_2149
Sulfite reduction-associated complex DsrMKJOP protein DsrM.
 
     0.689
D779_4232
Hypothetical protein.
  
     0.685
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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