STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_2206TRAP-type C4-dicarboxylate transport system, large permease component. (466 aa)    
Predicted Functional Partners:
D779_2205
TRAP-type transport system.
 
 0.998
D779_2204
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 0.988
D779_3839
Hypothetical protein.
 
 0.980
D779_4189
Pyruvate-flavodoxin oxidoreductase.
    
  0.929
D779_4160
Pyruvate-flavodoxin oxidoreductase.
    
  0.916
D779_0506
Putative peptide synthetase protein.
   
 0.901
D779_3838
TRAP transporter solute receptor.
 
 
 0.842
D779_2681
Long-chain-fatty-acid--CoA ligase.
   
 0.801
D779_2097
TRAP transporter solute receptor; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 0.789
D779_1322
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.771
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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