STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_2348Hypothetical protein. (505 aa)    
Predicted Functional Partners:
D779_2350
CRISPR-associated protein, CT1975 family.
 
 
 0.999
D779_2351
CRISPR-associated protein, CT1976.
 
 
 0.998
D779_2349
CRISPR-associated protein, Cse2 family.
  
 
 0.997
D779_2653
CRISPR-associated protein, CT1975 family.
 
 
 0.989
D779_2347
CRISPR-associated helicase Cas3, protein.
 
 
 0.983
D779_2654
CRISPR-associated protein, CT1976.
  
 
 0.970
D779_2652
Hypothetical protein.
  
 
 0.966
D779_2352
CRISPR-associated protein, Cse3 family.
 
  
 0.958
D779_2650
CRISPR-associated helicase Cas3, protein.
 
 
 0.929
D779_3501
Hypothetical protein.
 
 
 0.922
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.