STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_2379C4-dicarboxylate transporter/malic acid transport protein. (323 aa)    
Predicted Functional Partners:
D779_3839
Hypothetical protein.
  
  
  0.713
D779_3838
TRAP transporter solute receptor.
  
  
  0.688
D779_2204
TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
  
  0.649
D779_4152
Hypothetical protein.
 
     0.630
D779_2380
OmpA/MotB.
     
 0.609
D779_2378
Hypothetical protein.
       0.572
D779_0519
Membrane metalloprotease.
   
  
 0.459
D779_1694
Nitrogen fixation-related protein.
 
     0.426
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.