STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srkAYihE protein, required for LPS synthesis; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response. (329 aa)    
Predicted Functional Partners:
D779_1852
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.785
D779_1947
Threonine synthase.
    
 0.699
D779_2394
UPF0225 protein YchJ; Belongs to the UPF0225 family.
       0.690
D779_2829
Homoserine dehydrogenase.
    
 0.688
D779_0447
Aspartokinase; Belongs to the aspartokinase family.
  
 
 0.662
D779_0474
Hypothetical protein.
   
 
 0.604
D779_2283
Sensory box histidine kinase/response regulator.
  
 
 0.597
D779_0472
Hypothetical protein.
  
 
 0.566
D779_1322
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  
 0.546
D779_1461
Aminodeoxychorismate lyase.
  
  
 0.531
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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