STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_2508Type IV pilus assembly PilZ. (249 aa)    
Predicted Functional Partners:
D779_2509
Flagellar biosynthesis protein FlgN.
  
  
 0.917
D779_3687
Long-chain-fatty-acid--CoA ligase.
   
   0.912
D779_0969
Chemotaxis protein methyltransferase CheR.
  
  
 0.877
D779_3533
Diguanylate cyclase.
  
 
 0.849
D779_1997
Diguanylate cyclase.
  
 
 0.846
D779_2510
Hypothetical protein.
  
  
 0.813
D779_2506
Flagellar biosynthetic protein flhB.
  
    0.788
D779_0949
Diguanylate cyclase.
  
 
 0.787
D779_1432
PAS/PAC domain protein.
  
 
 0.787
D779_2551
Hypothetical protein.
  
 
 0.787
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.