STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_2953Phytoene synthase. (276 aa)    
Predicted Functional Partners:
D779_0728
Methyltransferase type 11.
    
 0.981
D779_0720
Phytoene dehydrogenase.
  
 
 0.951
D779_2557
Hypothetical protein.
 
  
 0.920
D779_1385
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.918
D779_1275
Geranylgeranyl hydrogenase BchP.
  
 
 0.917
D779_3799
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.917
D779_3860
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.917
D779_0171
Divinyl protochlorophyllide a 8-vinyl-reductase.
    
 0.894
nuoH
NADH-ubiquinone oxidoreductase chain H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 
 0.893
D779_1027
Phytoene dehydrogenase-related protein.
  
 
 0.892
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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