STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_3381Putative transmembrane protein. (215 aa)    
Predicted Functional Partners:
D779_4122
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 
 0.925
D779_4121
Cysteine desulfurase, NifS subfamily; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
  
 
 0.883
D779_2481
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
 
 0.783
D779_0997
Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ.
  
 
 0.653
D779_3588
Superfamily II DNA and RNA helicase.
  
 
 0.653
D779_3380
Hypothetical protein.
       0.552
D779_0753
DnaJ-like protein DjlA.
  
  
 0.513
D779_3950
Chaperone protein HscB.
  
  
 0.513
D779_2441
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.485
D779_0938
Sulfur carrier protein adenylyltransferase ThiF.
    
  0.470
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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