STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_3966Transcriptional regulator, MarR family. (166 aa)    
Predicted Functional Partners:
D779_3965
Putative membrane protein.
 
   
 0.946
D779_3963
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.926
D779_3964
Hypothetical protein.
       0.787
D779_2853
L-proline glycine betaine binding ABC transporter protein ProX.
  
  
 0.635
D779_0506
Putative peptide synthetase protein.
  
 
 0.609
D779_2896
Transcriptional regulator.
  
     0.549
D779_3761
Hypothetical protein.
 
  
 0.538
D779_2426
Hypothetical protein.
  
 
  0.520
D779_1547
Transcriptional regulator, IclR family.
   
 
 0.487
D779_0098
Putative cytoplasmic protein.
    
 0.484
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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