STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_4226Bacterioferritin. (101 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase, protoheme ferro-lyase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.891
D779_4225
Putative pterin-4 alpha-carbinolamine dehydratase-like protein.
       0.807
D779_2925
Methyl-accepting chemotaxis protein.
   
    0.751
D779_1284
Photosynthetic reaction center H subunit.
   
  
 0.719
D779_0174
Ferritin-like protein 2; Iron-storage protein.
     
 0.674
D779_4224
Hypothetical protein.
       0.608
D779_1347
Heme-degrading oxygenase IsdG.
     
 0.596
D779_0593
Anti-sigma F factor antagonist (spoIIAA-2).
   
  
 0.586
D779_0637
Anti-sigma F factor antagonist (spoIIAA-2); Belongs to the anti-sigma-factor antagonist family.
   
  
 0.586
D779_1177
Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
   
  
 0.586
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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