STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D779_4230ABC transporter, permease protein, putative. (829 aa)    
Predicted Functional Partners:
D779_4229
ABC transporter, ATP-binding protein.
 
  
  0.969
D779_4228
Arylesterase precursor.
 
     0.920
D779_2669
ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.737
D779_2092
AttE component of AttEFGH ABC transport system.
 
 
 0.708
D779_2094
AttH component of AttEFGH ABC transport system.
 
  
 0.687
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
  
 
 0.678
D779_4125
ABC transporter (glutamine transport ATP-binding protein).
  
 
 0.678
D779_0155
ABC transporter.
  
 
 0.647
D779_0292
ABC transporter, ATP-binding protein.
  
 
 0.647
D779_1411
Hypothetical protein.
  
 
 0.647
Your Current Organism:
Imhoffiella purpurea
NCBI taxonomy Id: 1249627
Other names: I. purpurea, Imhoffiella purpurea Nupur et al. 2017, JCM 18851, KCTC 15575, MTCC 12304, Thiorhodococcus sp. AK35, strain AK35
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