STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS35397.1Type IX secretion system membrane protein, PorP/SprF family. (302 aa)    
Predicted Functional Partners:
SDS35423.1
Outer membrane protein OmpA.
 
     0.922
SDS35356.1
Gliding motility-associated C-terminal domain-containing protein.
 
     0.757
SDR87367.1
Outer membrane protein OmpA.
  
     0.716
SDS75761.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.608
SDS44365.1
Hypothetical protein; Manually curated.
  
   
 0.603
SDR87329.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.600
SDS94931.1
WD40-like Beta Propeller Repeat.
  
     0.591
SDS61999.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.583
SDS61789.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.578
SDS80193.1
Hypothetical protein.
  
     0.578
Your Current Organism:
Winogradskyella sp. RHA55
NCBI taxonomy Id: 1249933
Other names: W. sp. RHA_55, Winogradskyella sp. RHA_55
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.